BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033H03SP1|AL429814
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1440 1782 0.0
>3x_Contig1440
Length = 8228
Score = 1782 bits (899), Expect = 0.0
Identities = 906/907 (99%), Gaps = 1/907 (0%)
Strand = Plus / Plus
Query: 1 atccgaattgtactgcaccgtaaacaacgtacatcgccgtcgccgggatgtttcctttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atccgaattgtactgcaccgtaaacaacgtacatcgccgtcgccgggatgtttcctttcc 490
Query: 61 ataacgctcgaagtccttcttctttcattatagttctcacagtagatgcaattcccttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ataacgctcgaagtccttcttctttcattatagttctcacagtagatgcaattcccttat 550
Query: 121 atttgtcctcttgtaccggttgtaactgatatcgtatttttacagtatccattggtgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atttgtcctcttgtaccggttgtaactgatatcgtatttttacagtatccattggtgcag 610
Query: 181 ttgccatcctagcaaataccccagaaacagaaccagcaatcactgaattgtaccatgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttgccatcctagcaaataccccagaaacagaaccagcaatcactgaattgtaccatgata 670
Query: 241 ccgtttcacctttcctgagatggtctttccttatgccagtgttcattctctcttcgtcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ccgtttcacctttcctgagatggtctttccttatgccagtgttcattctctcttcgtcat 730
Query: 301 taaataaatccctctctcttgatggattgaagattcactgaatgctggtctctcgctccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 taaataaatccctctctcttgatggattgaagattcactgaatgctggtctctcgctccc 790
Query: 361 ttctcagaacttaaatgaagccagacctacacacaatctccttatttataaattaccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ttctcagaacttaaatgaagccagacctacacacaatctccttatttataaattaccaca 850
Query: 421 tacatgccctgctaaaagggtctctggcacatcaattgcattgcatctccaacctcttag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tacatgccctgctaaaagggtctctggcacatcaattgcattgcatctccaacctcttag 910
Query: 481 tttcatatctattcattgcgtatcctaaaagtgaaaaatttctgaatttgaagctcatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 tttcatatctattcattgcgtatcctaaaagtgaaaaatttctgaatttgaagctcatct 970
Query: 541 catctcatcctgacataacattcaaaagatggggaaagagggactgtagtggctcattac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 catctcatcctgacataacattcaaaagatggggaaagagggactgtagtggctcattac 1030
Query: 601 cgtctataccgactgcgtattgattgttatattgtacctatagtaattttctagccaaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 cgtctataccgactgcgtattgattgttatattgtacctatagtaattttctagccaaga 1090
Query: 661 tggagactacgacgcatgttttgggccatgttgatggctcttctgttgtttcaaacagcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 tggagactacgacgcatgttttgggccatgttgatggctcttctgttgtttcaaacagcg 1150
Query: 721 gaactaaagttatctgttctgtttcgggacccatggaacctaagtctaggcaagagttgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 gaactaaagttatctgttctgtttcgggacccatggaacctaagtctaggcaagagttgc 1210
Query: 781 ccacacaacttgcattagagatcatcgtgaagcctgctgaaggcgtacagagtacgaggg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1211 ccacacaacttgcattagagatcatcgtgaagcctgctgaaggcgtacagagtacga-gg 1269
Query: 841 gaaaagttaatggaagatcagatccgttctgtgttgaccccagtgcttgcgagatacttg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1270 gaaaagttaatggaagatcagatccgttctgtgttgaccccagtgcttgcgagatacttg 1329
Query: 901 catccac 907
|||||||
Sbjct: 1330 catccac 1336
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6704
Number of Sequences: 1807
Number of extensions: 6704
Number of successful extensions: 303
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)